A Guide to Wildlife in the San Juan Islands

Did you know the San Juan Islands are home to one of the most diverse ecosystems in the entire world? It’s true!

Every time we set out on a whale watching tour by boat, our number one goal is to see whales. Most days we do, but we also see a huge variety of other wildlife, including animals many of our guests have never seen up close before! Our kayak tours encounter a variety of diverse wildlife, and sometimes whales, too!

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Spyhopping Southern Resident Killer Whale off of Henry Island, WA

Sunday mornings, especially on holiday weekends, are my favorite times to be at Roche Harbor. The excitement in the air is palpable, usually the sun is shining in a bright blue sky, and we have the chance to welcome and host a group of very enthusiastic people.

This Labor Day weekend was no different. On our 11am departure we had a group of our Southern Resident Killer Whales reported off the Westside of...

We pulled out of beautiful, sunny Roche Harbor in hopes of finding killer whales (orcas) in the thick fog that surrounded the southern half of San Juan Island. We began heading south and had to turn on our radar and use a fog horn to communicate with surrounding vessels, it was a unique way to travel but also very safe. As we began slowing in the fog - we spotted two black dorsal fins cutting through the water. We had spotted K-Pod (southern resident killer whales)! We...

Today we got geared up and headed out on a 5 hour kayaking trip out of Roche Harbor.  We started out by seeing lot's of harbor seals once we paddled to the Haro Strait.  Continuing south we had the opportunity to see a juvenile bald eagle as well as an adult hanging out in a 5 foot wide nest.  Not long after we were surprised by orcas appearing off our right hand side.  We got to spend about 15 minutes with the whales before they swam off and got looks as close as 50...

Here in the San Juan Islands we are constantly surrounded by beautiful marine wildlife. Our waters are home to a wide diversity of marine mammals including four species of whales, two species of dolphins, two species of porpoises, two species of seals, two species of sea lions, and we also have the possibility of seeing two species of otters! With such a great array of species, we sometimes come across injured or dead wildlife on our tours or while wandering the islands...

Today we started out by launching out of county park and started paddling north on a 5-hour kayaking trip.  The weather was perfect with blue skies and sunshine the entire trip.  Not long after being on the water we were surprised by a harbor seal popping up with 15 yards with what looked like a canary rockfish in its mouth.  We got to watch it gorge itself for awhile before paddling on.  We stopped for lunch and were just finishing up when we spotted a bull orca.  So we...

Guests were excited as we departed Roche Harbor and headed straight for Friday Harbor, and straight for the killer whale reports. Once arriving on scene, guests got great looks at the T-49s otherwise known as the transient killer whales. We were lucky enough to see two spy hops and some social behavior!

While sitting right outside of Friday Harbor, guests began wondering about the history of the San Juan Islands (SJI). The islands are over 100 million years old, and can...

Today is J pod's third day back in the Salish Sea after about a month of absence. We were thrilled the hear that they were making their way to the west side of San Juan Island this morning, just in time for the Seahawk's first trip of the day! We headed out of Roche Harbor through Mosquito Pass and rounded the corner to the west side. Pretty soon we got into view of Lim Kiln Lighthouse, and were greeted by the members of the J16 family group!

We watched Mike as he...

We started our trip out today with reports of transient killer whales just off the coast of Victoria. Feeling determined and adventurous, we started out south, hoping to spot them as they moved away from Discovery Island. We braved a particularly choppy voyage down Haro Strait before breaking through to glass-calm seas at the junction of Haro Strait and the Strait of Juan de Fuca.

As soon as we had spotted some distant dorsal fins cutting through the water, a juvenile...

Yesterday we had yet another amazing day of encounters with some of the magnificent cetaceans that call the Salish Sea home. Captain Mike and I headed out on a bit of a grey afternoon in search of adventure and whales, of course. We had a lovely group of guests on board, and even a few birthdays!

We steered the mighty M/V Sea Lion north towards the Canadian Gulf Islands where we found J Pod, part of our Southern Resident Killer Whale population, traveling south through...